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Biomedical : Protein Sequence Databases

AbbreviationDatabase
UniProt• Universal Protein knowledgebase (Swiss-Prot @ TrEMBL)
@ Protein Structure Databases
2-D reference gel of human healthy pulp tissue
ASEdbAlanine Scanning Energetics database
ARABI-COILArabidopsis Coiled-Coil Protein Database
CluSTrAutomatic classification of UniProt and IPI proteins into groups of related proteins
COGsClusters of Orthologous Groups of proteins
ProtRepeatsDBDatabase of amino acid repeats in genomes
FusionDBDatabase of bacterial and archaeal gene fusion events
DCCPDatabase of Copper-Chelating Proteins
Phospho.ELMDatabase of experimentally verified phosphorylation sites in eukaryotic proteins
BioGRIDDatabase of protein and genetic interactions
PROSITEDatabase of protein families and domains
InterProDatabase of protein families, domains and functional sites
IntActDatabase system and analysis tools for protein interaction data
EcoProDBE. coli protein database of protein information identified on 2-D gels
SelenoDBEukaryotic selenoprotein genes, proteins, SECIS elements and related molecules
Evola: ortholog information of all human genes among vertebrates
ConSurf-DBEvolutionary conservation profiles of protein structures
Globin Gene Server
G-Protein Coupled Receptor Database
Human Protein Atlas
HPRDHuman Protein Reference Database
GPCRDBInformation system for G protein-coupled receptors (GPCRs)
NucleaRDBInformation System for Nuclear Receptors
KChannelDBInformation System for Potassium channels
IPIInternational Protein Index
IUPHAR Compendium of Voltage-gated Ion Channels
List of post-translational modifications
Mammalian Degradome Database: Complete repertoire of proteases expressed by a tissue or organism
MPDBMembrane Protein Data Bank
MiSTMicrobial Signal Transduction database
Music of Protein Sequences
CDDNCBI Conserved Domain Database
NCBI Entrez Protein Database Search
NURSANuclear Receptor Signaling Atlas
PeroxiBasePlant Peroxidase Database
PSDBPlant Subtilase Database of plant subtilisin-like serine proteases
PROMISEProsthetic groups and Metal Ions in Protein Active Sites Database
Proteases of E. coli
PDBTMProtein Data Bank of Transmembrane Proteins
SYSTERSProtein Family Database
PhosphaBaseProtein Phosphatase Information Resource
PRIDEPRoteomics IDEntifications database
SRPDBSignal Recognition Particle Database
SWISS-PROT Protein knowledgebase
TCDBTransport Classification Database - for membrane transport proteins
GELBANKTwo-dimensional gel electrophoresis (2DE) images of proteomes
2DPAGETwo-dimensional polyacrylamide gel electrophoresis database
World-2DPAGE Portal - gel-based proteomics databases

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