Israel Science and Technology Directory

Biomedical Databases

Metabolic Pathways - Models and Databases
AbbreviationDatabase
BioCartaBioCarta Charts - Dynamic graphical models of biological pathways
EAWAG-BBDBiocatalysis/Biodegradation Database - Microbial biocatalytic reactions and biodegradation pathways primarily for xenobiotic, chemical compounds
Biological pathway related resources
CellMLCellML Model Repository
E-CellE-Cell Project to model and reconstruct biological phenomena in silico
ECMDBEcoli Metabolome Database
GMDGolm Metabolome Database of reference mass spectra from biologically active metabolites quantified using gas chromatography (GC) coupled to mass spectrometry (MS)
HMDBHuman Metabolome Database
IUBMB-Nicholson Metabolic Maps
Inborn Errors of Metabolism Map
JWS Online Cellular Systems Modelling
MetaCycMetaCyc database of metabolic pathways
Metabolic Pathways of Biochemistry
MANETMolecular Ancestry Network
NetPath: A manually curated resource of signal transduction pathways in humans
ReactomeReactome - a curated knowledgebase of biological pathways
UniPathwayReactome open-source, curated and peer-reviewed pathway database