Israel Science and Technology Directory

Biomedical Databases : DNA, RNA and Protein Sequence Databases

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AbbreviationDatabase
DDBJ• DNA Data Bank of Japan
ENA• European Nucleotide Archive
• NCBI Nucleotide Database
BiozonA meta database of molecular data
ALFREDALlele FREquency Database
ProSplicerAlternative Splicing Database based on Protein, mRNA, and EST Sequences
Bioperl Project - open source Perl tools for bioinformatics, genomics and life science research
CORGCOmparative Regulatory Genomics Conserved non-coding genomic DNA segments
Common Access to Biological Resources and Information
DiProDBDinucleotide Property Database
EIDExon Intron Database
Gallery of Sequence Logos
GeneCards: Database of human genes
Genetic Codes for translation of RNA sequence into amino acids
INSDCInternational Nucleotide Sequence Database Collaboration
RefSeqNCBI Reference Sequence: a curated non-redundant sequence database of genomes, transcripts and proteins
dbSNPNCBI Single Nucleotide Polymorphism (SNP) Database, Human Genome
PhosphoSite, protein modification sites
Plant Specific Database
Reference Sequence (RefSeq) Database
Refseq Accession Number Format
STRBaseShort Tandem Repeat (STR) DNA Internet DataBase
Vector Database

Note: GenBank is a redundant archival sequence database. For reference standards use the newer NCBI Reference Sequence (RefSeq). RefSeq accession numbers are distinguished from GenBank accessions by their format of [2 characters|underline]. For example, a RefSeq mRNA code is NM_000336 (Additional examples and key).