Israel Science and Technology Directory

DNA, RNA and Protein Sequence Databases

Abbreviation	Database
DDBJ	• DNA Data Bank of Japan
ENA	• European Nucleotide Archive
	• NCBI Nucleotide Database
ALFRED	Allele FREquency Net Database
AFND	Allele Frequency Net Database - immune gene frequencies worldwide
BIGSdb	Bacterial Isolate Genome Sequence Database
	Bioperl Project - open source Perl tools for bioinformatics, genomics and life science research
CORG	COmparative Regulatory Genomics Conserved non-coding genomic DNA segments
	Common Access to Biological Resources and Information
DiProDB	Dinucleotide Property Database
	GeneCards: Database of human genes
	Genetic Codes for translation of RNA sequence into amino acids
INSDC	International Nucleotide Sequence Database Collaboration
RefSeq	NCBI Reference Sequence: a curated non-redundant sequence database of genomes, transcripts and proteins
dbSNP	NCBI Single Nucleotide Polymorphism (SNP) Database, Human Genome
	PhosphoSite, protein modification sites
WebLogo	Sequence Logos
STRBase	Short Tandem Repeat (STR) DNA Internet DataBase
	Vector Database

Note: GenBank is a redundant archival sequence database. For reference standards use the newer NCBI Reference Sequence (RefSeq). RefSeq accession numbers are distinguished from GenBank accessions by their format of [2 characters|underline]. For example, a RefSeq mRNA code is NM_000336 (Additional examples and key).