Israel Science and Technology Directory

Biomedical Databases : Protein Interaction (PPI) Databases

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AbbreviationDatabase
APIDAgile Protein Interactomes DataServer
BioGRIDBiological General Repository for Interaction Datasets
3DIDDatabase of 3D interacting domains
GpDBDatabase of GPCRs, G-proteins, Effectors and their interactions
DIPDatabase of Interacting Proteins
PiSITEDatabase of Protein interaction SITEs
iMOTdbDatabase of Spatially Interacting Motifs in Proteins
CC+Database of coiled-coil structures
DOMMINODatabase of macromolecular interactions
BindingDBDatabase of measured binding affinities for small, drug-like molecules
TRIPDatabase of protein-protein interactions for mammalian Transient Receptor Potential (TRP) channels
PIBASEDatabase of structurally defined protein interfaces
MatrixDBDatabase on interactions between extracellular proteins and polysaccharides
DynaSINDynamic Structure Interaction Network
NPInterFunctional interactions between noncoding RNAs (except tRNAs and rRNAs) and proteins related biomacromolecules
GLIDAG-protein coupled receptors (GPCRs) Ligand Database
HotRegionHotRegion: a database of predicted hot spot clusters
GPS-ProtHuman protein-protein interactions (PPI). HIV-1 protein interactions.
PIPsHuman protein-protein interactions prediction database
ICBSInter-Chain Beta-Sheets
Interactome Database
JAILInterfaces between protein chains and proteins and nucleic acids
IMExInternational Molecular Exchange Consortium
I2DInterologous Interaction Database of known and predicted mammalian and eukaryotic protein-protein interactions
STRINGKnown and Predicted Protein-Protein Interactions
MIPSMammalian Protein-Protein Interaction Database
MPIDBMicrobial protein interaction database
IntActMolecular Interaction Database
MINTMolecular Interactions Database
NuRISITENuclear Receptor Interaction Site
interactions of residues in the DNA-binding domains (DBDs) with response elements
NPIDBNucleic acid - Protein Interaction DataBase
ProtinDBPROTein-protein INterface residues Data Base
ADANPrediction of protein-protein interAction of moDular domAiNs
InterProSurfProtein-Protein Interaction Server
SpiricoilProteins containing coiled coils in genomes
PDBe PISAProteins, Interfaces, Structures and Assemblies
SCOPPIStructural Classification of Protein-Protein Interfaces
UniHIUnified Human Interactome